Picard
Picard 1.113 for Windows
Alec Wysoker, Kathleen Tibbetts, Tim Fennell, Ben
Java tool that lets you work with BAM files, perform format conversions, building indexes, clean SAM files, collect RNA metrics and more
Picard was built as a set of tools using the Java programming language so that you can work with next generation sequencing data in the BAM format. Now you can use this accessible, handy Command-Line based set of instruments you can manage and work with all the available BAM files.

Software Summary:

You can run Picard on Windows operating systems. Picard is a software product developed by Alec Wysoker, Kathleen Tibbetts, Tim Fennell, Ben and it is listed in the category. Picard is a free software product and it is fully functional for an unlimited time although there may be other versions of this software product.

Alternatives in on Windows