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VarScan 2.3.7 for Windows

Dan Koboldt

Easily identify SNPs with this application

VarScan is a Java-based tool that is specially designed to be a platform and technology-independent utility for identifying SNPs and indels in massively parallel sequencing of individual and pooled samples. Given data for a single sample, VarScan identifies and filters germline variants based on read counts, base quality, and allele frequency. Given data for a tumor-normal pair, VarScan also determines the somatic status of each variant (Germline, Somatic, or LOH) by comparing read counts between samples.

Software Summary:

You can run VarScan on Windows operating systems. VarScan is a software product developed by Dan Koboldt and it is listed in the category. VarScan is a free software product and it is fully functional for an unlimited time although there may be other versions of this software product.